
Cheap Apartments for Rent in the Mission Bay Neighborhood of San Diego, CA from $1,000 (39 Rentals)
Search the lowest-cost Apartments available for rent right now in the Mission Bay area of San Diego.


3304 Baltimore St

Total Monthly Price
Cedar Shores

Total Monthly Price
2043 Reed Ave, Unit 2043

2055 Morena Blvd

The Villager Bay Park

732 Ventura Pl

1360 Hornblend St

Ingraham - La Playa Point LP
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1633-1639 Hornblend St

Bay Apartments

AVA Pacific Beach

Total Monthly Price
Elan Baylofts

1168 Hornblend St

2142-48 Oliver Ave

2950 Bayside Ln

2512 Clairemont Dr, Unit 216

855 Emerald St
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Swiss Chalet Apartments

1849-1867 Morena Blvd

The Pacific Lamont

Casa Riviera

4117 1/2 Ingraham St.

Bay Park Apartments

1128 Felspar Street

Sail Bay Apartments

Pacific Beach Dr - FULLY FURNISHED
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Bahia Jewell

(zzz-7/12) 1452

4256 Noyes St

Viking Pacific

Royal Reed Apartments

Mission Beach Apartment Homes

1133 Grand Ave

Ocean Palms Apartments

Riviera Marina
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1133 Reed Ave

831 Tangiers Ct

1327 Grand Ave
Mission Bay, San Diego, CA Local Guide

How much does it cost to rent an apartment in Mission Bay?
| Bedroom | Average Rent | Cheapest Rent | Highest Rent |
|---|---|---|---|
| Mission Bay Studio Apartments | $2,198 | $1,084 | $3,310 |
| Mission Bay 1 Bedroom Apartments | $3,596 | $1,180 | $9,405 |
| Mission Bay 2 Bedroom Apartments | $3,977 | $1,750 | $9,937 |
| Mission Bay 3 Bedroom Apartments | $8,051 | $3,775 | $10,000+ |
Browse Apartments in this Neighborhood
There are currently 39 rentals with your search options within a 2 mile radius of the Mission Bay Neighborhood of San Diego, CA.
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Mission Bay, San Diego, CA Local Guide
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Cheapest Available Mission Bay Apartments for Rent
 The cheapest available apartment rental in the Mission Bay area of San Diego, CA is a Studio unit found at The Villager Bay Park priced from $1,995. 1360 Hornblend St has the second lowest priced unit, which is a 1 Bed apartment currently listed from $2,000. Here are the most affordable Mission Bay apartments for rent in San Diego, CA:
| Apartment Listing | Model Name | Bed/Bath | Priced From |
|---|---|---|---|
| The Villager Bay Park | 0BR/1.0BA | Studio,1BA | $1,995 |
| 1360 Hornblend St | 1 Bed 1 Bath | 1BR,1BA | $2,000 |
| Bay Apartments | Design EA Premier | Studio,1BA | $2,220 |
| AVA Pacific Beach | S1 | Studio,1BA | $2,251 |
| Viking Pacific | 1BR/1.0BA | 1BR,1BA | $2,500 |
| 2950 Bayside Ln | 1 Bedroom 2950 | 1BR,1BA | $2,600 |
| Elan Pacific Lofts | 2x1 | 2BR,1BA | $3,295 |
Best Value Apartments for Rent in Mission Bay, CA
As of July 26, 2026 the best value apartment in the Mission Bay area is the $4.81 price per square foot 2313 Morena Blvd Model at 2313 Morena Blvd in the in the Bay Park neighborhood starting from $3,850. The second greatest value Mission Bay apartment is the 2x1 Model at Elan Pacific Lofts starting at $3,295 with a $4.71 price per square foot in the Bay Ho neighborhood. Here is today’s list of the best values for Mission Bay apartments based on price per square foot:
| Apartment Listing | Model Name | Bed/Bath | Price Per Sq.Ft. |
|---|---|---|---|
| 2313 Morena Blvd | 2313 Morena Blvd | 2BR,1BA | $4.81 |
| Elan Pacific Lofts | 2x1 | 2BR,1BA | $4.71 |
| Viking Pacific | 1BR/1.0BA | 1BR,1BA | $3.97 |
| 1360 Hornblend St | 1 Bed 1 Bath | 1BR,1BA | $3.33 |
| Bay Apartments | Design EA Premier | Studio ,1BA | $3.70 |
| 2950 Bayside Ln | 1 Bedroom 2950 | 1BR,1BA | $4.73 |
| The Villager Bay Park | 0BR/1.0BA | Studio ,1BA | $3.99 |
| AVA Pacific Beach | S1 | Studio ,1BA | $5.56 |
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From the letter A all the way to the letter Z, the Real Estate and Rental Term Glossary from the content team at ApartmentHomeLiving.com provides our visitors and shoppers with a little clarity and helpful guidance in navigating the real estate world through definitions and explainers for the top subjects and terms that someone may come across during the leasing, buying, or selling process.
Read ArticleQuick Rent Budget Calculator
How much rent can you afford?
The common "Rule of Thumb" is that rent should be no more than 30% of your income. How much is that? Enter your monthly income and click "Calculate My Budget" to find out.
Pet Friendly LifestyleMission Bay, San Diego, CA
Ranked #96
Among cities in California for Apartment listings with Pet Friendly Amenities.
Pet Friendliness Lifestyle Score
4.0Pet Friendly
Frequently Asked Questions about Cheap Mission Bay Apartments
What is the Cheapest Studio apartment in Mission Bay?
Currently the most affordable Cheap Studio Apartment in Mission Bay is at The Villager Bay Park listed at $1,995.
How much is rent for a Cheap One Bedroom Mission Bay Apartment?
The lowest price for a Cheap One Bedroom Mission Bay Apartment is $2,000 at 1360 Hornblend St.
What is the lowest price for a Cheap Two Bedroom Mission Bay Apartment for rent?
Today's best deal for a Cheap Two Bedroom Apartment in Mission Bay is starting from $3,295 at Elan Pacific Lofts.
Expert Rental Resources
The rental experts at ApartmentHomeLiving.com provide you with top advice, tools, and tips for understanding the leasing process and finding the perfect rental. Here are a few helpful rental and leasing articles from our experts to guide you on your search.
Helpful Local Expert Guides

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Sun, surf, clean air, healthy lifestyles, and a coastline that seems to stretch as far as the eyes can see.

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Choosing the right place to live during your college years can make or break your collegiate experience. My name is Hayden, I’m a San Diego area expert with ApartmentHomeLiving.com and have been in the real estate world for years.

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